State outline of Michigan

Michigan's reinstated R&D tax credit features a fully refundable structure, tiered rates based on company size, and a unique 5% bonus for R&D conducted in collaboration with Michigan research universities.

Michigan R&D Tax Incentives at a Glance

State Credit Structure:

  • Tiered rates by employee count: 15% above base (small businesses, under 250 employees); 10% above base (large businesses, 250+); 3% on expenses up to the base amount for both tiers
  • Fully refundable when the statewide cap is not exceeded; no carryforward or carryback required
  • $100 million annual statewide cap; prorated if claims exceed the cap
  • University collaboration bonus: additional 5% credit (up to $200,000/year) for R&D performed under a formal agreement with an eligible Michigan research university

Federal Benefits:

  • Available for all qualifying U.S. research
  • Payroll tax offset option for eligible startups
  • Stackable with the Michigan state credit

Important Michigan Tax Note:

Michigan has decoupled from federal IRC Section 174. While federal law restored immediate expensing of domestic R&D costs starting in 2025, Michigan requires businesses to amortize these costs over five years for state purposes, meaning Michigan taxable income may be higher than federal taxable income for R&D-intensive companies.

Who Qualifies for Michigan R&D Tax Credits?

To qualify, a business must be subject to Michigan Corporate Income Tax or be a flow-through entity subject to Michigan income tax withholding, conduct qualified research within Michigan, and incur MQREs exceeding the base amount for the calendar year. A tentative claim must be filed with the Michigan Department of Treasury before the credit can be claimed on the annual return.

Note on eligibility:

Corporations filing under the Michigan Business Tax due to a certificated credit election are not eligible. The credit must be claimed at the entity level and cannot be assigned or transferred.

Michigan R&D Credits

What Research Activities Qualify in Michigan?

Michigan follows federal standards under IRC Section 41. Your activities must satisfy all four criteria to qualify for the credit:

Developing New or Improved Business Components

You are creating or substantially enhancing a product, process, computer software, manufacturing technique, formula, or invention.

Technical Nature Required

Your activities fundamentally rely on engineering, computer science, physical sciences, biological sciences, or chemistry.



Technological Uncertainty Exists

You face genuine technical questions about capability, methodology, or appropriate design, not just commercial uncertainty about market acceptance.

Process of Experimentation Used

You are systematically evaluating alternatives through modeling, simulation, prototyping, trial-and-error testing, or iterative refinement.

 

Michigan-Specific Note: Only research conducted within Michigan qualifies for the state credit. All MQRE calculations, including the base amount, must be performed on a calendar-year basis even for fiscal-year filers. The same expenses can qualify for both federal and Michigan credits if the work occurred in Michigan.

What Expenses Qualify for R&D Tax Credits in Michigan?

Icon of a man holding a briefcase.

Wages and Salaries

Compensation for Michigan-based employees directly conducting, supervising, or supporting qualified research activities.

Icon of a piece of paper with a pencil on top.

Supplies

Materials consumed during the research process in Michigan (excludes land, depreciable property, and general inventory).


Icon of a women typing at a computer.

Cloud Computing and Server Rental

Expenses for rental of off-site and cloud-based server space used for design or testing of new or improved software, an explicit inclusion under Michigan law.

Icon of a finger poking a ripple.

Contract Research

Amounts paid to third parties performing qualified research on your behalf in Michigan (subject to federal requirements).


The same expenses can count toward both the Michigan and federal credits if the work occurred in Michigan. All expense calculations must be made on a calendar-year basis regardless of fiscal year.

Michigan-Specific Benefits

Tiered Credit Structure

Michigan uses employee count to determine which credit tier applies. Both tiers earn 3% on MQREs up to the base amount. For expenses exceeding the base amount, small businesses (fewer than 250 employees) earn 15%, capped at $250,000 per year; large businesses (250 or more) earn 10%, capped at $2,000,000 per year.

The base amount is the average of MQREs for the three calendar years immediately preceding the credit year. Companies with no prior Michigan R&D history have a base amount of zero in their first year, meaning the full incremental rate applies to all Michigan QREs with no threshold to clear.

University Collaboration Bonus

Michigan offers an additional 5% credit on qualifying R&D expenses incurred through a formal written agreement with an eligible Michigan research university, capped at $200,000 per tax year. The collaborating expenses must also exceed the base amount and be included in the primary credit calculation. Eligible universities include the University of Michigan, Michigan State University, Wayne State University, Michigan Technological University, and other qualifying public and independent nonprofit colleges and universities in Michigan. Companies already working informally with Michigan universities should formalize those relationships to capture this bonus.

Florida Claim Previous Credits

Federal R&D Tax Credit for Michigan Companies

Michigan businesses can claim the federal R&D credit in addition to state benefits for qualifying research conducted anywhere in the U.S. The federal credit can be calculated using the Regular Research Credit (RRC), which compares current spending to a historical baseline, or the Alternative Simplified Credit (ASC), a streamlined three-year average method often preferred by newer claimants. Note that Michigan's base amount calculation uses the full three-year average without the 50% reduction applied under the federal ASC method.

Qualified small businesses can apply the federal credit against payroll taxes up to $500,000 per year, providing immediate cash flow benefits for Michigan startups. Businesses should also evaluate the Section 280C election, which affects how R&D deductions interact with the federal credit calculation.

R&D Credits for Michigan Industries

See how companies in Michigan's key sectors qualify

Automotive and Advanced Mobility

New vehicle platforms, electric powertrains, battery systems, ADAS technologies, or autonomous vehicle solutions through engineering iteration and prototype testing.

Advanced Manufacturing and Robotics

Production automation, process control, robotic assembly, or quality improvements through engineering innovation and systematic testing.

Life Sciences and Medical Devices

Pharmaceutical formulations, biologics, genetic therapies, diagnostic equipment, or implantable devices through laboratory experimentation and clinical validation.

Software and Technology

New software architectures, algorithms, cloud platforms, or AI/ML systems through iterative development; cloud computing costs are explicitly qualifying expenses.

Defense and Aerospace

Advanced materials, propulsion systems, navigation technologies, or mission-critical components through systematic engineering and prototype testing.

Clean Energy and Environmental Technology

Renewable energy systems, battery storage, grid efficiency improvements, or sustainable materials through technical research and experimentation.

How to Claim Michigan R&D Tax Credits

Step 1:

Calculate Your Credit

Gather Michigan-specific QRE data on a calendar-year basis and calculate your base amount using the average of the three prior calendar years. Apply 3% to expenses up to the base amount and 10% or 15% (depending on employee count) to expenses exceeding the base amount. Add the 5% university collaboration bonus if applicable.


Step 2:

File a Tentative Claim with Michigan Department of Treasury

Submit your tentative claim via Michigan Treasury Online (MTO) before the applicable deadline: April 1, 2026 for 2025 expenses; March 15 of the following year for 2026 and later. The claim must use actual, not estimated, expenses and will be used in any proration calculation if the $100 million statewide cap is exceeded. No extensions are allowed and late claims will not be accepted.

 

Step 3:

Claim the Credit on Your Annual Return

After Treasury publishes its proration notice, claim the credit on your annual CIT return or flow-through entity return, adjusted for any proration. Apply the credit after all other non-refundable credits. Any amount exceeding your Michigan tax liability is refunded directly.

What Records Should You Keep For Michigan State Credit?

Project Descriptions:

  • Descriptions of each research project and technical objectives
  • Documentation that research occurred within Michigan
  • Technical challenges being resolved and the nature of the technological uncertainty
  • How the company systematically approached solving those challenges
  • Results, outcomes, iterations, and evidence of a process of experimentation
  • Geographic evidence for multi-state companies confirming Michigan-based activities


Financial Records:

  • Payroll records for research personnel working in Michigan
  • Time tracking or contemporaneous estimates for research activities (calendar-year basis)
  • Geographic allocation for employees working in multiple states or on mixed projects
  • Receipts for supplies and materials used in Michigan research activities
  • Invoices and contracts for cloud computing expenses related to software development
  • Contracts with third-party researchers, consultants, and outside labs
  • Written agreements with Michigan research universities (required for collaboration bonus)

Technical Materials:

  • Design documents, engineering specifications, and technical drawings
  • Test results, laboratory notes, and simulation outputs
  • Prototypes, development iterations, and related materials
  • Source code and technical documentation (for software companies)
  • Meeting notes, technical discussions, and project timelines
  • Milestone tracking and project status documentation



Michigan-Specific Documentation:

  • Evidence proving research occurred in Michigan (not other states)
  • Employee location tracking for multi-state companies
  • Calendar-year expense records (even for fiscal-year filers)
  • Records supporting the base amount calculation for each of the three prior calendar years
  • Written formal agreement with Michigan research university (required for collaboration bonus)
  • Documentation of employee count for determining the applicable rate tier
businessman or accountant working pointing graph discussion and analysis data charts and graphs and using a calculator to calculate numbers. Business finances and accounting concept

Estimate Your R&D Tax Credit in Minutes

Find out how much your innovative work could earn back in tax credits. Use our quick calculator to estimate your potential savings — no forms, no hassle.

Saving Money, Spurring Innovation

Every day, companies nationwide further the mission of innovation with new products, processes and initiatives that change the landscape of how we do business. But innovation takes funding, and with that comes a vicious cycle: You need money to grow your business and develop your products and services… but you also need to do those same things to bring money in.

That’s why R&D tax credits were established. Designed to encourage companies like yours to invest in the innovation, creation and improvement of products or processes, R&D tax credits can offset some of the costs associated with research and development — fueling growth and technological advancement.

Pitfalls Michigan Companies Should Avoid

Missing the tentative claim deadline

The tentative claim must be filed by April 1, 2026 for 2025 expenses, and March 15 annually thereafter. No extensions are allowed, and Treasury will not accept late claims. Missing this deadline means forfeiting the credit entirely for that year.

Using estimated instead of actual expenses

Tentative claims must reflect actual, not estimated, expenses. Because tentative claims are used in the proration calculation, inaccurate claims can create compliance issues and undermine the accuracy of statewide proration determinations.

Computing expenses on a fiscal-year rather than calendar-year basis

Both fiscal-year and calendar-year filers must calculate MQREs and the base amount on a calendar-year basis. Fiscal-year filers who report expenses on a fiscal-year basis will miscalculate their credit.

Missing the new-entrant zero base amount advantage

Companies with no prior Michigan R&D history have a base amount of zero in their first year, meaning the full incremental rate (10% or 15%) applies to all Michigan QREs. Companies that underestimate this benefit may underclaim significantly in their initial year.

Failing to pursue the university collaboration bonus

The additional 5% credit for R&D performed under a formal agreement with a Michigan research university is capped at $200,000 and requires a written agreement - but many qualifying companies never explore this option. Companies already working informally with Michigan universities should formalize those relationships.

Not tracking research location

Only Michigan-based research qualifies for the state credit. Multi-state activities require careful geographic tracking and documentation.

Mixing in non-qualifying time

Including project management, sales support, routine quality control, or general administrative work inflates claims and increases audit risk.

Overlooking the Michigan Section 174 decoupling

Michigan does not conform to the federal immediate expensing of R&D costs under the One Big Beautiful Bill Act. Companies that deduct R&D immediately at the federal level must still amortize these costs over five years for Michigan purposes, creating a state/federal difference that needs careful accounting.

Assuming the credit is non-refundable

Unlike many state programs, Michigan's credit is fully refundable when the statewide cap is not exceeded. Companies that assume they cannot benefit because they have limited or no Michigan tax liability may be leaving significant cash on the table.

Attempting to assign or transfer the credit

Michigan's R&D credit cannot be assigned or sold to another taxpayer. Unlike Pennsylvania's transferable credit, Michigan's program requires the claimant to use the credit (or receive a refund) directly.

Can You Claim Credits for Previous Years in Michigan?

Michigan's reinstated credit applies only to tax years beginning on or after January 1, 2025, so prior years cannot be recovered through the state program. However, the federal R&D credit remains available on amended returns for open tax years within the applicable statute of limitations. Many Michigan companies that were eligible for the federal credit in prior years may have significant unclaimed historical credits available.

Companies new to Michigan R&D also benefit from the zero base amount advantage in their first year, making 2025 an ideal time to begin tracking Michigan-specific R&D expenses and establish the baseline needed for future credit calculations. A professional review can identify qualifying activities, quantify available federal credits across open years, and position your company to maximize credits going forward.

WA state R&D lookback window

Watch our latest videos to learn more!

Confused about whether you qualify or how the credits work? Our videos break it all down for you.

Ready to Maximize Your Michigan R&D Tax Credits?

Michigan's reinstated R&D credit is one of the most compelling new state incentive programs in the country - combining full refundability, tiered rates that favor smaller businesses, and a unique university collaboration bonus. Whether you are tracking Michigan R&D for the first time, positioning your company for the university bonus, or coordinating Michigan and federal credits for maximum benefit, our team provides expertise in both Michigan compliance and federal optimization.

Michigan R&D Tax Credit FAQ

What makes Michigan's R&D credit program unique?

Michigan's program stands out for three reasons: it is fully refundable (excess credits are paid out in cash rather than carried forward), it offers a unique 5% university collaboration bonus for R&D performed with Michigan research universities, and it was newly reinstated in 2025 after more than a decade of inactivity - making now an ideal time for Michigan companies to establish their R&D expense tracking systems and begin building a base amount history.

How does Michigan's refundability work?
Can I claim both Michigan and federal credits for the same research?
What if my company has no Michigan R&D history?
What types of activities qualify in Michigan?
What documentation do I need?
Who qualifies as a small business under Michigan's program?
What is the tentative claim and why is it required?
Can multi-state companies claim the Michigan credit?
What happens if the $100 million statewide cap is exceeded?

Access the latest Michigan R&D tax credit information and filing requirements:

Michigan Department of Treasury: R&D Tax Credit Program

Official program overview, eligibility, and filing guidance

Treasury Notice Regarding New R&D Credit

Official Treasury notice describing the credit, base amount rules, tentative claim process, and proration

Michigan Treasury Online (MTO): Tentative Claim Portal

Online portal for filing the required tentative R&D credit claim

Base Amount Calculation Guidance

Michigan Treasury guidance on calculating the base amount for the R&D credit

MCL 206.677 - CIT R&D Credit Statute

Complete statutory framework for Corporate Income Tax filers

IRS Form 6765

Federal R&D credit form and instructions

MCL 206.717 - Flow-Through Entity R&D Credit Statute

Complete statutory framework for flow-through entity filers

IRC Section 41

Federal law defining qualified research activities

Need more information? Check out our thought leadership library.

Many businesses qualify for the R&D tax credit without realizing it. Learn what counts and how to claim it in 2026.

How the R&D Tax Credit for Businesses Turns Everyday Problem-Solving Into Tax Savings

The R&D tax credit for businesses is one of the most valuable dollar-for-dollar tax incentives…

Read Article
A worker wearing a yellow hard hat, safety glasses, and a plaid shirt inspects solar panels inside an industrial facility.

Manufacturing R&D Tax Credit: Are You Leaving Money on the Table?

Most manufacturers don’t think of their daily operations as research and development. That misunderstanding might…

Read Article
A person in business attire is working at a desk, using a calculator to review and fill out tax forms. Documents and a laptop are spread across the workspace, emphasizing a focus on financial calculations or tax-related tasks.

Payroll Tax Credit for R&D: A Strategic Option for Startups

For many businesses, especially startups, the traditional R&D tax credit is a valuable tool for…

Read Article
A business professional is using a calculator while taking notes in a binder filled with organized documents. The scene conveys a focus on tax preparation and tax credits.

How the R&D Tax Credit Carryforward (Unused Credits) Works for Businesses

What Does “Carryforward” Mean for R&D Tax Credits? Research & development (R&D) tax credits are…

Read Article
A group of tax professionals in business attire gather around a laptop, engaged in a focused discussion on R&D tax credits.

A Comprehensive Guide to Finding the Best R&D Tax Credit Provider

The research and development (R&D) tax credit can provide a significant financial benefit to businesses…

Read Article
A close-up of a calculator, pen, and glasses resting on a document labeled "Tax and Credits."

James Moore Announces New Research & Development (R&D) Tax Credit Services Line

James Moore & Company is proud to announce the launch of the firm’s Research and…

Read Article

Be the First to Hear.

Sign up for our newsletter and have it delivered to your inbox, so you don’t miss a thing.

Professional headshot of Lucia Valenzuela.

Lucia Valenzuela

Chief Innovation Officer (CInO)

Lucia is the driving force behind the adoption of new technologies and services at our firm. She stays up to date on advancements and works with firm leadership to develop and implement strategic plans that align with our goal of enhancing the client and employee experience.

Lucia brings to James Moore a decade of experience and forward-thinking leadership in technology, public accounting and tax law matters. A trusted advisor in the field of R&D tax credits, she has successfully guided thousands of companies through the complexities of filing for that credit. Her other notable achievements include the market launch of revolutionary tax software and building a large specialty tax practice at a top 50 accounting firm.

Lucia’s knowledge of technology, strategic partnerships, teambuilding, public accounting and tax law provides our firm with a new and unique perspective on client service and operations. Outside of James Moore, Lucia is active in local bar associations and their respective boards. She also volunteers with Project Youth, Step-Up and other organizations focused on mentoring and empowering underprivileged youth in their journeys toward college.

Full Profile

This information serves general educational purposes and does not constitute tax, legal, or accounting advice. Tax laws and regulations change regularly. Michigan's R&D credit structure, including credit rates, annual caps, tentative claim requirements, and refundability provisions, is subject to adjustment by the Michigan Department of Treasury and the Michigan legislature. Michigan has decoupled from certain federal tax provisions, including IRC Section 174 R&D expense treatment, and these state/federal differences should be carefully analyzed with qualified tax professionals. Federal R&D credit information reflects law as of February 2026 but remains subject to modification. Specific rates, percentages, thresholds, and per-taxpayer caps should be verified with current tax law and qualified tax professionals. Consult qualified tax professionals before making decisions based on this information. Documentation and substantiation requirements are critical for defending claims during audit.

Last Updated: February 2026
Next Review: Quarterly or upon state or federal legislative or administrative changes